11 June 2020
Ian Ronald JENKINSON
杨海风 YANG Hai Feng
Born: 25 April 1948 at Colwyn Bay, Wales, UK
Agency for Consultation and Research in
Mobile 1: +33 608
89 13 62
Hydrosphere Biorheology Laboratory
Photo: Tomoyuki Shikata
QUALIFICATIONS (date awarded) ^
Ph.D. in Marine Biology
The Queen's University of Belfast
M.Sc. in Oceanography
University of Southampton
B.Sc. in Zoology and Marine Biology
University of Wales, Bangor
THREE COURSES ^
1987 Modelling and Management of Marine Systems. Two weeks. Copenhagen: Royal Danish Pharmaceutical High School and Council of Europe. Led by Dr S.E. Jørgensen
1980 Rheology of Fluids: Two weeks, University College of Wales Aberystwyth. Led by Professor Ken Walters.
1976 Identification of Phytoplankton for Advanced Participants. Three weeks, University of Oslo. Led by Dr G. Hasle.
Advisory Board of the 15th, 16th, 17th,
18th International Conferences on Harmful Algae.
2012-14 Evaluation Panel of Katerva Awards for sustainability.
2009 Chinese Academy of Sciences, Beijing - Awarded Visiting Professor for Senior International Scientists
2008- Council of the International Society for the Study of Harmful Algae
2007-15 Editorial Board of Journal of Oceanographic Research and Data
2006/7 Scientific Committee of the 4th International Plankton Symposium (PSIV), João Pessoa, Brazil, 1-5 April, 2007
2005 Chairman of Session on Copepods in Estuaries and the case of Eurytemora affinis, 9th International Conference on Copepoda, Hammamet, Tunisia, July 11-15, 2005
2005 Scientific Council - Plankton Symposium III, Figuera da Foz, Portugal, March 17-20
2004 Editorial Board of BDUA - Journal of Biology
2004-6 Strategic Editor of the Journal of Plankton Research of Oxford University Press
1997 Participated in decisions of the International Panel on Harmful Algal Blooms (IOC of Unesco)
1997 Local organizer of the Annual Meeting of the ICES/IOC Working Group on Harmful Algal Bloom Dynamics, 22-26 April, at Saint Pardoux La Croisille, Corrèze, France.
1995- Editorial board of the Journal of Plankton Research.
1995 Elected president of the Association Canillacoise pour la Promotion de La Recherche Océanographique (ACRO - La Roche Canillac)
1993- External assessor (member of jury) for Ph.D. Theses (National University of Ireland, Université de Paris VI, Université de Bordeaux I, University of Pondicherry, University of Tasmania)
1986 Invited by the Intergovernmental Oceanographic Commission, as scientific expert and sole delegate for France, to a Workshop on International Collaboration on Red Tide Research, at Takamatsu, Japan; also subsequently invited to participate in a number of their meetings.
Review of manuscripts for the
Scientific (and other) ship
1966 - In student vacation, went
for 23 days on one of the last British steam trawlers from
Grimsby, fishing mostly for cod off Iceland. I studied the gut
contents of cod, and presented a student report to my university.
1975-1983 - First as part of my postdoctoral fellowship, then as independent consultant, took part in very numerous scientific cruises (mostly 1 or 2 weeks) off the west and south coasts of Ireland, mainly with the Department of Oceanography, frequently as cruise leader (Senior Scientist). Research vessels included the Queen of Aran, the Corunna, and the Irish national Research Vessel, Lough Beltra.
1983 participated in a cruise with the British National Institute of Oceanography to the Porcupine Sea Bight (Irish Economic Zone) aboard the British Royal Research Ship Challenger as observer for the Irish Government and invited researcher, 2 weeks.
1988 - Cruise in North Sea as Senior Scientist aboard Research Ship Victor Hensen (Alfred-Wegener-Institut, Bremerhaven, Germany), 3 days.
1996 - Cruise in North Sea aboard Danish Research Ship Dana (Danish Institute for Fisheries Research, Hirtshals), 2.5 weeks.
More boat time, see Pastimes
English: Mother tongue, medium of nearly all my education.
French: Second language, learnt at school (Jersey) from 6 years old: Proficiency almost that of English.
Danish: Basic communication (reading, writing, speaking, understanding)
Italian: Basic communication (reading, writing, speaking, understanding)
German: Basic communication with more difficulty (reading, speaking, understanding)
communication (speaking, reading, understanding, typing).
Linux: Principal operating system.
Windows 7: Second operating system
Html and web-page development software: Good competence in Mozilla-like composers; ftp tools.
Imaging software: Image Tools, PaintShop Pro, The Gimp: Reasonable competence
Technical evaluation of software for turbulence imaging, data acquisition, processing and presentation, using data bases and access by internet (1998-2001 - European Commission ALICE project - see below)
CAREER PROFILE ^
|1985-present||I run the Agency for Consultation and
Research in Oceanography (ACRO), Lavergne, F-19320 La
Roche Canillac, France. This agency has two
1) Fundamental and collaborative research in oceanography. Public money for research is thereby trapped within the oceanographic discipline and so funds research more than once. Partly simultaneously, and partly interspersed with this activity I have been funded directly for research as follows (items back to 1987)
2) Editorial work, Linguistic and scientific pre-refereeing service mainly for clients in French Government research institutions and universities, helping them to translate, and both linguistically and culturally adapt their manuscripts for submission to international scientific journals in the English language.
Academy of Sciences, Institute of Oceanology,
People's Republic of China
- Chinese Society for Oceanology and Limnology, Journal for Oceanology and Limnology (CJOL then JOL)
- Executive Editor-in-Chief of JOL (English-Language section)
- Simultaneous research activities, both in China and at the ACRO laboratory, France.
Academy of Sciences, Institute of Oceanology,
People's Republic of China
- Senior Invited Research Professor with the Chinese Academy of Sciences.
- Collaborative project on biopolymer modification of physical oceanographic processes.
|2006-2008||University of Kyushu, "Kyudai", Fukuoka,
Roles, both in Japan and at the ACRO laboratory, France:
- co-mentoring doctoral students and post-docs associated with the Laboratory of Marine Environmental Science;
- lecturing to graduate students within the Graduate School of Bioresource and Bioenvironmental Sciences;
- collaborative research on biorheology in relation to polymers secreted by harmful algae;
- collaborative research on conditions for germination, growth, allelopathy and interspecies competition, especially in harmful algae
de Lille, Station Marine, Wimereux
Within the French programme, PNEC (National research Programme on the Coastal Environment), working on rheological properties in blooms of the harmful alga, Phaeocystis.
|2001-2003|| Journal of
Plankton Research (Oxford
Editor in Chief
|2002-2005||Centre de Recherche sur l'Environnement et
l'Aquaculture (CREMA - L'HOUMEAU - CNRS/IFREMER).
Characterising the rheological properties of marine intertidal and benthic fluff (crème de vase) using an ichthyoviscometer, measuring its flow through the gills of juvenile sole, and modelling its effect on ventilation and respiration.
|1998 - 2001||
ACRO collaborated with 8 other
groups in a European ESPRIT 4 Project
ALICE (Quantitative Flow Field Visualisation).
|July 1995 - July 1996||Danish Institute for Fisheries and Marine
Research, Charlottenlund, Denmark (with Prof.
Visiting Senior Research Fellow to work on visualization of turbulence, feeding of zooplankton, adhesion and recognition in phytoplankton, and other, related topics. Lectured to Ph.D. and M.Sc. students at the University of Copenhagen.
|1994, May|| University of Lund, Sweden.
Took part in a Swedish expedition (leader Dr E. Granéli,) to Fano on the Italian Adriatic.
Investigation of algal succession in relation to the problem of mucus production (mare sporco) in the Adriatic. Financed by the Swedish Government as a parallel contribution to the European Commission's programme MAR.
|1993-1995||Centre de Recherche sur l'Environnement et
l'Aquaculture (CREMA - L'HOUMEAU - CNRS/IFREMER) and
Financed by the French National Programme on Toxic Algal Blooms to investigate the rôle of mucus in mechanisms of toxic action by phytoplankton at fish gills.
|1988 (6 months)||Alfred-Wegener-Institut for Polar and
Marine Research, Bremerhaven, Germany (contact person:
Professor V. Smetacek).
Invited researcher. Rheology (deformation and flow properties) of seawater in relation to the phytoplankton content, as well as on the rheology of marine organic aggregates in relation to their microbial succession.
Teaching (in English) to Masters students at the University of Bremen on manipulation of marine organic aggregates, and measurement of their physical properties, as well as more general instruction on the pelagic food web.
1987 (4 months) - On contract to the United Nations Environmental Programme (UNEP) Mediterranean Blue Programme, through the Research Centre for Biology and Medical Oceanography (CERBOM), Nice, set up computer programmes to give quick presentation of fish landings by country and species (using FAO data), and also to model future pollution loadings in the Mediterranean, as functions of different envisaged scenarios.
1983 to 1985 - University of Nice, Laboratory for Marine Biology and Ecology (head Professor R. Vaissière (retired)
Temporary lecturer (Assistant associé)
Teaching of seminars and practical classes at levels of the B.Sc., Masters (Specialisation in Biology of Organisms and Populations) and Secondary-School Teaching Diploma (Licence, Maîtrise, CAPES et Agrégation).
Participation in the FRONTAL project (Professor P. Nival)
Personal research on the rheology of phytoplankton cultures and then on seawater at four times of year (Collaboration with Professor M. Rinaudo, CNRS Centre for Plant Macromolecules, Grenoble)
1981-1983 - With the help of the Department of Fisheries (Dublin), carried out a survey of eels in Ross Lake, County Galway, and then set up an eel fishery and export business.
1979-1983 - Worked as free-lance oceanographic consultant for various clients. Some of this work led to reports authored by myself (see last item). Also worked on red tides at Sherkin Island Marine Station, Co. Cork
1978-1981 - Regional Technical
College Galway (Dr. Barbara Wild)
Part-time teaching of Biology up to the level of B.Sc. in Aquaculture.
1975-1978 - National University of Ireland (University
College Galway), Department of Oceanography
Post doctoral fellowship: phytoplankton of waters west of Ireland (Professor B. McK. Bary)
1972 - 1975 - The Queen's University of Belfast (Marine Biology Station Portaferry)
Doctoral Fellowship (Tughan Trust) to study the plankton
and nutrients of Strangford Lough, a non-stratified fjord, in
relation to tidal and residual currents.
Demonstrating in Zoology at Belfast and various aspects of Marine Algal and Animal Ecology (both pelagic and littoral) during field courses at Portaferry.
1971-1972 - University of
Bordeaux I (Arcachon Marine Biology Station)
French Government Scholarship to investigate the epibionts on three species of oyster, live and dead shells, in three salinity regimes (Professors R. Weil, J.-P. Boisseau, Dr C. Cazaux)
1970-1971 - University of
Southampton (Department of Oceanography)
M.Sc in Oceanography by exam and dissertation.
In addition to the multidisciplinary parts of the course, I took
the following special options:
1969-1970 - Hinde House
Comprehensive School, Sheffield, England. Teaching Mathematics and
1968-969 - University of Liverpool (Department of Botany)
Research Assistant; investigation into the effects of copper and tin on the germination and growth of green and brown ship-fouling algae
Demonstrating in macroalgology
1965-1968 - University College of North Wales Bangor (now University of Wales, Bangor)
B.Sc (General Scheme) in Zoology and Marine Biology (Auxiliary subject: Biochemistry and Soil Science)
MEMBERSHIP OF SCIENTIFIC SOCIETIES ^
Association Canillacoise pour la promotion de la Recherche Océanographique (President)
Association for the Sciences of Limnology
British Phycological Society
International Society for the Study of Harmful Algae
(Chair of Statutes Committee)
British Society for Rheology
Marine Biological Association of the United Kingdom
Groupe français de Rhéologie
Union des Océanographes de France
Sailing since I was 10 (including yacht delivery as professional skipper, around France, Spain, Italy, England, Ireland, Netherlands, Germany and Denmark - the last time in 2002); Skiing; Hill and country walking, recently in Corrèze, France and a lot in the Laoshan peaks of Shandong, China; Reading; Singing; A bit of gardening and DIY.
6-2005 Jenkinson, Ian R. and Ryan,
Tom. Copepods and other netplankton in the Shannon estuary,
Ireland, and two tributary estuaries: Composition and grazing
pressure. 9th International Conference on Copepoda, Hammamet,
Tunisia, July 11-15 2005. Abstract.
(17 MB) Bottom line is
that grazing pressure by the Euphausiid Mesopodopsis
slabberi is 2 orders of
magnitude more than that by the copepods.
5-2005 Jenkinson, I.R. Understanding the mechanisms and dynamics of whole seawater at metre to micrometre scales: Can we still make do with proxies? TOS-IOC International Ocean Research Conference, Unesco, Paris , June 6-10 2005. Poster [pdf]. (May not read correctly with Ghostview or kGhostview. Xpdf or Adobe Acroread seem to work.)
3-2004 Jenkinson, I.R., Blanc, N., Claireaux, G., Leguay, D. Deschamps, S., Guillou, G. and Gentien, P. Using a fish as a rheometer: fluid-mud flow over gills as a function of particulate organic matter concentration. Oral presentation, ASLO/TOS Ocean Research Conference, Feb. 15-20, Honolulu, Hawai'i, USA. Abstract
2-2004 Jenkinson, I.R. Effects of phytoplankton on turbulence from small to large Reynolds numbers: A model with fractally intermittent turbulent dissipation and fractally distributed excess shear-thinning viscosity in fractally aggregated phytoplankton exopolymer. Oral presentation, European Geosciences Union, 1st General Assembly, Nice, France 25-30 April 2004. Geophysical Research Abstracts, Vol. 6.
1-2004 Jenkinson, I.R. Effects of
phytoplankton on ocean turbulence: Observations using Particle
Tracking Velocimetry (PTV). Poster presentation, European
Geosciences Union, 1st General
Assembly, Nice, France 25-30 April 2004. Geophysical
Research Abstracts, Vol. 6 ; Poster [pdf]
Trouble accessing a paper? Request a copy
Edition of Collective work
Song, SUN Xiao-Xia & JENKINSON I.R. (Guest editors). Special
Issue on Giant Jellyfish Blooms and Climate Change. Hydrobiologia,
Vol. 754: 1-214.
McManus, M.A., Berdalet, E., Ryan, J. , Yamazaki, H., Jaffe,
J.S., Ross, O.N., Burchard, H., Jenkinson, I. &
Chavez, F.P. (eds), Global Ecology and Oceanography of Harmful
Algal Blooms, GEOHAB Core Research Project: Advances and
Challenges for Understanding Physical-Biological Interactions in
HABs in Stratified Environments. IOC and SCOR, Paris and Newark,
Delaware, USA, 62 p. [web
U.M., Jenkinson, I. & Pereira, M.J. (Guest editors).
Plankton Studies. Hydrobiologia,
1-1987 Dale, B., Baden, D.G.,
Bary, B.McK., Edler, L., Fraga, S., Jenkinson, I.R., Hallegraeff,
G.M., Okaichi, T., Tangen, K., Taylor, F.J.R., White, A.W.,
Yentsch, C.M. & Yentsch, C.S. The Problems of Toxic
Dinoflagellate Blooms in Aquaculture. Proceedings of a
Workshop and Conference, Sherkin Island, Ireland, 8-13 June 1987,
86-2020 M. Rajkumar, S.
Azhagar, J. Sun, I.R. Jenkinson, M. Mustafizur Rahman,
J. Sesh Serebiah. Seasonal variations of plankton in Kodiakkarai
and Arukattuthurai on the Vedharanyam coast, South India. Regional
Studies in Marine Science. https://doi.org/10.1016/j.rsma.2020.101461
85-2020 Santosh Kumar Karn,
Anne Bhambri, Ian R. Jenkinson, Jizhou Duan &
Awanish Kumar. The roles of biomolecules in corrosion induction
and inhibition of corrosion: a possible insight. Corrosion Reviews. https://doi.org/10.1515/corrrev-2019-0111
84-2020 Ian R. Jenkinson,
Elisa Berdalet, Wei-Chun Chin, Haibing Ding, Jizhou Duan,
Florence Elias, Zhuo Li, Xavier Mari, Laurent
Seuront, Jun Sun, Oliver Wurl, Tim Wyatt. Algal blooms: how are
they harming models used for climate management? In: Hess, P.
(ed.), Harmful Algae 2018 – from ecosystems to
socioecosystems. Proceedings of the 18th International
Conference on Harmful Algae. International Society
for the Study of Harmful Algae, pp. 38-41.
83-2020. Jiawei Hu, Zhuo Li, Ai
Zhang, Shun Mao, Ian R. Jenkinson & Wenquan Tao.
Using a strong chemical oxidant, potassium ferrate (K2FeO4),
in waste activated sludge treatment: A review. Environmental
82-2020. Le Qiang, Yu Zhang,
Chao Wu, Yingkuan Han, Suchun Wang, Yanyan Wang, Congcong Zhang,
Guangzhou Liu, Qi Wu, Hong Liu, Ian R. Jenkinson, Jun
Sun, & Lin Han. A facile and sensitive DNA sensing of
harmful algal blooms based on graphene oxide nanosheets. Marine
81-2019. Santosh Kr. Karn &
Ian R. Jenkinson. Book review: Plastics and Microplastic: a
major risk factor to the soil, water and marine environments. Current
Biotechnology, 8(1): 64-67
doi : 10.2174/2211550108999190717091621
80-2019. Yanqiu Zhang, Sensen
Sheng, Shun Mao, Xiaohan Wu, Zhuo Li, Wenquan Tao & Ian R.
Jenkinson. Highly sensitive and selective fluorescent detection
of phosphate in water environment by a functionalized
coordination polymer. Water Research, 163: 114883
79-2018. Na Wei, Thangaraj
Satheeswaran, Ian R. Jenkinson, Bing Xue, Yuqiu Wei, Haijiao Liu
& Jun Sun. Factors driving the spatiotemporal
variability in phytoplankton in the Northern South China Sea. Continental
Shelf Research, 162: 48-55. doi.:
78-2018. Robin Raine,
Elisa Berdalet, Hidekatsu Yamazaki, Ian Jenkinson &
Beatriz Reguera. Key questions and recent research advances on
harmful algal blooms in stratified systems. In: Glibert,
P.M., Berdalet, E., Burford, M., Pitcher. G.C. & Zhou, M.
(eds), Global Ecology and Oceanography of Harmful Algal
Blooms. Springer Nature, Cham, pp 165-186. [Reviewed book
77-2018. Jenkinson, I. R.,
Seuront, L., Ding, H. & Elias, F. Biological modification of
mechanical properties of the sea surface microlayer, influencing
waves, ripples, foam and air-sea fluxes Elementa Science of
the Anthropocene, 6: 26. doi.: 10.1525/elementa.283
76-2017. ZHANG, Jingsi, LI,
Ning, DAI, Xiaohu, TAO, Wenquan, JENKINSON, Ian R. & LI, Zhuo.
Enhanced dewaterability of sludge during anaerobic digestion
with thermal hydrolysis pretreatment: New insights through
structure evolution. Water Research, 131,
177-185. doi.: 10.1016/j.watres.2017.12.042
75-2017. Jenkinson, I. R. Using
a matrix of scales to understand better the effects of toxic
components produced by harmful algae. In: Proença,
L. A. O. & Hallegraeff, G. (eds.), Marine and
Freshwater Harmful Algae; Proceedings of the
17th International Conference on Harmful Algae, International
Society for the Study of Harmful Algae, Copenhagen & IOC of
UNESCO, Paris, pp. 70-73.
74-2017. Karn, Santosh Kr., Duan,
Jizhou, & Jenkinson, Ian R. Book review: Role of
biofilms in bioremediation. Frontiers in Environmental Science,
5: doi.: 10.3389/fenvs/2017.00022
73-2017. Karn, Santosh Kr., Pan, Xiangliang and Jenkinson, Ian R. Transformation and immobilization of Arsenic (As) in soil by combined using of arsenite oxidizing bacterium and FeCl3. 3 Biotech. 7: 50. doi.: 10.1007/s13205-017-068-1 .
72-2015. Jenkinson, I. R.,
Sun, X. X. & Seuront, L. HORIZONS: Thalassorheology, organic
matter and plankton: towards a more viscous approach in plankton
ecology. Journal of Plankton Research, 37(6), 1100-1109
71-2015. Jenkinson, I. R.,
Berdalet, E., Chin, W.-C., Herminghaus, S., Leterme, S.,
Mitchell, J. G., Orchard, M., Qiu, R., Seuront, L., Wang, P.,
Wyatt, T. & LI, Z. Micro- and nano-fluidics
around HAB cells. In: MacKenzie, N. (ed.), Marine
and Fresh-Water Harmful Algae, Cawthron Institute, Nelson,
New Zealand & International Society for the Study of
Harmful Algae, Copenhagen, pp. 171-174.
70-2015. SUN Song, SUN
Xiao-Xia & JENKINSON I.R. Preface: giant jellyfish
blooms in Chinese waters. Hydrobiologia,
754: 1-11. doi: 10.1007/s10750-015-2309-y
69-2014. Jenkinson, I.R.
Nano- and Microfluidics, Rheology, Exopolymeric Substances and
Fluid Dynamics in Calanoid Copepods. In: Seuront, L.
(ed.), Copepods: Diversity, Habitat and Behavior,
Nova Science Publishers, Hauppauge, New York, USA, pp
68-2014. Rajkumar, M., Sun, J.,
Jenkinson, I.R. & Rahman, M.M. Seasonal variations
in the structure of copepod assemblages in tropical marine and
estuarine waters, Coleroon, south-east India. Journal of the
Marine Biological Association of the United Kingdom, 91:
521-535. doi:10.1017/S0025315413001765 [pdf]
E., McManus, M.A., Ross, O.N., Burchard, H., Chavez, F., Jaffe,
J.S., Jenkinson, I., Kudela, R., Lips., I., Lucas, A.,
Rivas. D., Ruiz de la Torre, M.C., Ryan, J., Sullivan, J.
& Yamazaki, H. Understanding harmful algae in
stratified systems: reviews of progress and identification of
gaps in knowledge. Deep-Sea Research II, 101:
Jenkinson, I.R. & Sun, J. Drag increase and drag
reduction found in phytoplankton and bacterial cultures in
laminar flow: Are cell surfaces and EPS producing rheological
thickening and a Lotus-leaf Effect? Deep-Sea Research II, 101: 216-230. [Published
65-2013. Shikata, T., Matsunaga, S., Nishide, H., Higashi, S-i., Iseki, M., Yamaguchi, M., Kamei, Y., Jenkinson, I.R. & Watanabe, M. Blue light regulates the rhythm of diurnal vertical migration in a microflagellate. Journal of Plankton Research, 35: 542-552. doi:10.1093/plankt/fbt006 [pdf]
Sun, J. Thalassorheology, algal blooms and vertical carbon flux.
In: Kalliopi, P. &
Hallegraeff, G. (eds), Proceedings
14th International Conference on Harmful Algae. International
Society for the Study of Harmful Algae and Intergovernmental
Oceanographic Commission of UNESCO, pp. 155-153. [ISSHA
site - Online pdf]
Rajasekar, K., Sun, J., Jenkinson, I.R., Ashok Prabu, V.
& Perumal, P. Phytoplankton diversity in the Parangipettai
coastal waters, southeast coast of India. Journal of Environmental Biology,
33: 1115-1125. [pdf]
62-2011. Yu, R[encheng]. & Jenkinson, I. Chinese involvement in international HAB studies. Harmful Algae News, , No. 43, 9. [Here]
Jenkinson, I.R. & Sun, J. A model of pycnocline
thickness modified by the rheological properties of
phytoplankton exopolymeric substances. Journal of Plankton Research, 33: 373-383. http://dx.doi.org/10.1093/plankt/fbq099 [pdf]
Jenkinson, I.R. & Sun, J. Rheological properties of
natural waters with regard to plankton thin layers. A short
review. Journal of Marine Systems, 83: 287-297. http://dx.doi.org/10.1016/j.jmarsys.2010.04.004
59-2010. Jenkinson, I.R.
Thickening in HABs and thin layers: The need to bring
rheological expertise into research teams. In: Ho, K.C., Zhou, M. and
Qi, Y. (eds), Harmful
Algae 2008: Proceedings of the 13th International Conference on
Harmful Algae. International
Society for the Study of Harmful Algae, Copenhagen and
Environmental Publishing House, Hong Kong, pp. 92-94 Preprint
58-2009. Yamasaki, Y., Shikata,
T., Nukata, A., Ichiki, S., Nagasoe, S., Matsubara, T.,
Shimasaki, Y., Nakao, M., Yamaguchi, K., Oshima, Y., Oda, T.,
Ito, M., Jenkinson, I.R., Asakawa, M. & Honjo, T.
Protein-polysaccharide complexes of a harmful alga mediate the
allelopathic control within the phytoplankton community. International
3: 808-817. [pdf]
[Mega-dalton protein-polysaccharide complexes produced by the
akashiwo, control community structure allelopathically,
through species-specific recognition and binding to other
phytoplankton at cell concentrations characteristic of natural,
dense blooms. This mechanism is reminiscent of those acting in
cell-specific recognition and binding associated with control of
development and apoptosis in both mammals and flowering plants.]
57-2008. Shikata, T.,
Yoshikawa, S., Matsubara, T., Tanoue, W., Yamasaki, Y.,
Shimasaki, Y., Matsuyama, Y., Oshima, Y., Jenkinson, I.R.
& Honjo, T. Growth dynamics of Heterosigma akashiwo
(Raphidophyceae) in Hakata Bay, Japan. European Journal of Phycology, 43(4):
56-2008. Jenkinson, I.R. Towards measuring mucus events. Harmful Algae News, No. 36: 15. [Here]
Jenkinson, I.R. & Wyatt, T. Rheological properties
of exopolymeric secretions in HABs may be functions of length
scale. In: Moestrup,
Ø. et al. (eds)
Proceedings of the 12th International Conference on Harmful
Algae. International Society for the Study of Harmful Algae,
Copenhagen and Intergovernmental Oceanographic Commission of
UNESCO, Paris, pp. 126-128. pdf
54-2008. Shikata, T., Nagasoe, S., Matsubara,T., Yoshikawa, S., Yamasaki, Y., Shimasaki, Y., Oshima, Y., Jenkinson, I.R. & Honjo, T. Factors influencing the initiation of blooms of the raphidophyte Heterosigma akashiwo and the diatom Skeletonema costatum in a port in Japan. Limnology and Oceanography, 53(6): 2503-2518 [free access pdf].
53-2008 Jenkinson, I.R. Ocean
Rheology and Plankton Biology. In:
Co, A., Leal, L. G., Colby, R. H. & Giacommin (eds), The XVth International Congress on
Rheology, American Institute of Physics, pp. 636-638. pdf
52-2008. Shikata, T., Nagasoe, S., Matsubara, T., Yamasaki, Y., Shimasaki, Y., Oshima, Y., Uchida, T., Jenkinson, I.R. & Honjo, T. Encystment and excystment of Gyrodinium instriatum Freudenthal et Lee. Journal of Oceanography, 64: 355-365 [pdf]
51-2007. Jenkinson, I.R., Shikata, T. & Honjo, T. Modified ichthyoviscometer shows high viscosity in Chattonella culture. Harmful Algae News, No. 35: pp 1, 3-5. [Here]
50-2007. Jenkinson, I.R.,
Claireaux, G. & Gentien, P. Biorheological properties
of intertidal organic fluff on mud flats: importance for gill
ventilation in buried sole Solea solea. Marine
Biology, 150: 471-485 http://dx.doi.org/10.1007/s00227-006-0340-2
(~600 ko) [Correction: The last term in Equation 1 should read "(ALR+ASR)"
instead of "(ALR-ASR)". Thanks to Jin Shao
Fei (graduate student at IOCAS, Qingdao, P.R. China) for pointing
this out. The error does not change any of the paper's
49-2006. Jenkinson, I.R. The Shannon Estuary. In: Dauvin, J.-C. (ed.), North-Atlantic Estuaries: Problems and Perspectives, Groupement d'Intérêt Scientifique Seine-Aval, Rouen, France, pp. 63-66. (French version here ).
48-2006 Jenkinson, I.R. Book
Review: Gorsky, G., Youngbluth, M.J. & Deibel D. (eds)
Response of Marine Ecosystems to Global Change: Ecological Impact
of Appendicularians. ISBN 2847030298 Editions Scientifiques,
Paris. Journal of Plankton Research, 28: 535-536. [full
47-2004 Jenkinson, I.R. Book Review: Seuront, L. & Strutton, P.G. (eds) Handbook of Scaling Methods in Aquatic Ecology: Measurement, Analysis, Simulation, CRC Press, 2003. Journal of Plankton Research, 26: 585-587 [Full text].
46-2004 Harris, R., Jenkinson, I. & Lehman, J. The first 25 years of Journal of Plankton Research: looking to the future Journal of Plankton Research, 26: 1-3 [Full Text]
45-2003. Jenkinson, I.R. Contribution 8. In: MEPS Discussion Forum 2, Peer-review system, Riisgård, H.U. (ed.). Marine Ecology Progress SeriesOnline Discussion Forum, (last consulted 12 Jan 2012).
44-2002. Jenkinson, I.R. Using management and mitigation to prevent kills of finfish reared in net-pens. In: Arzul, G. (coordinator), Aquaculture, Environment and Marine Phytoplankton, Editions Ifremer, Plouzané, France, pp. 211-216.
43-2002. Jenkinson, I.R. & Arzul, G. Mitigation by cysteine compounds of rheotoxicity, cytotoxicity and fish mortality caused by the dinoflagellates, Gymnodinium mikimotoi and G. cf. maguelonnense. In: Hallegraeff, G.M., Blackburn, S.I., Bolch, C.J. and Lewis, R.J. (eds), Harmful Algal Blooms 2000. IOC of UNESCO, Paris, pp. 461-464 [preprint pdf].
D., Favaro, J., Sünder, B., Jenkinson, I., Tanzini, G.,
Hazarika, B.K., R[ibera] d'Alcalà, M., Vicinanza, D., Greco, R.
& Pasanisi, A. Fast and convenient access to fluid dynamics
data via the world wide web. European Congress on Computational
Methods in Applied Sciences and Engineering, ECCOMAS, Barcelona,
11-14 Sep., 2000, 8 pp.
41-2000. Jenkinson, I.R. Mitigation in HAB research. Harmful Algae News, No. 21, 1-4. [Here]
40-1998. Wyatt, T., Jenkinson, I.R. & Malej, A. How viscoelastic properties of colloids, transparent exopolymeric particles and marine organic aggregates, modify turbulence and plankton biodynamics in the sea. In: Emri I. & Cvelbar, R. (eds), Proc. 5th eur. rheol. Conf., Portoroz, Slovenia, Sept. 6-11, 1998, Progress and Trends in Rheology 5: 65-66.
39-1998. Malej, A., Jenkinson, I.R. & Flander, V. Marine organic aggregates in the northern Adriatic Sea, their physical microstructure and biological origins. In: Emri I. & Cvelbar, R. (eds), Proc. 5th eur. rheol. Conf., Portoroz, Slovenia, Sept. 6-11, 1998, Progress and Trends in Rheology 5: 59-60.
38-1998. Jenkinson, I.R., Wyatt, T. & Malej, A. How viscoelastic effects of colloidal biopolymers modify rheological properties of seawater. In: Emri I. & Cvelbar, R. (eds), Proc. 5th eur. rheol. Conf., Portoroz, Slovenia, Sept. 6-11, 1998, Progress and Trends in Rheology 5: 57-58.
37-1998. Jenkinson, I.R. & Arzul, G. Effect of the flagellates, Gymnodinium mikimotoi, Heterosigma akashiwo and Pavlova lutheri, on flow through fish gills. In: Reguera, B., Blanco, J., Fernández, M.L. and Wyatt, T. (eds), Harmful Microalgae, Xunta de Galicia, Vigo, and IOC of Unesco, Paris, pp. 425-428. AbstractFull paper
36-1997. Jenkinson, I.R. [Review of the book] Patterns in the Ocean: Ocean Processes and Marine Population Dynamics by Andrew Bakun. Harmful Algae News, No. 16, 6-7 . [Here]
35-1997 Wyatt, T. & Jenkinson, I.R. Notes on Alexandrium population dynamics. Journal of Plankton Research, 19(5), 551-575 [pdf - 2.1 MB].
34-1996 Jenkinson, I.R. & Gentien, P. Bermuda discussion groups: Bulk-phase rheology and small-scale processes. Harmful Algae News, No. 15, 13-15. [Report of a discussion group at the NATO Advanced Study Institute on The Physiological Ecology of Harmful Algal Blooms (Bermuda, 27 May -6 June 1996).]
33-1996 Jenkinson, I.R. Using a fish as a rheometer: results using algal bloom organisms. In Report of the ICES/IOC Working Group on Harmful Algal Bloom Dynamics (WGHABD), Brest, France, 17-20 April 1996, ICES C.M. 1996/L:4, 6 (abstract)
Gentien, P., Wyatt, T., Jenkinson, I.R., & Granéli, E.
Review [of] present knowledge of the abilities of certain harmful
algae to adapt to and modify the microscale physical environment
by means [of] vertical migration, mucilage secretion, colony
formation, etc. Report of the ICES/IOC Working Group on Harmful
Algal Bloom Dynamics (WGHABD), Helsinki, Finland, 17-19 May 1995,
C.M. 1995/L:4, 7- 11.
31-1995 Jenkinson, I.R. & Biddanda, B.A. Bulk-phase viscoelastic properties of seawater: relationship with plankton components. Journal of Plankton Research, 17(12), 2251-2274 [pdf - 2.1 MB].
30-1995 Jenkinson, I.R. A review of two recent predation-rate models: The dome-shaped relationship between feeding rate and shear rate appears universal. International Council for the Exploration of the Sea, Journal of Marine Science, 52, 605-610. [Points out that dome-shaped relation modelled by Jenkinson & Wyatt (1992) for the laminar regime, and similar relation modelled in the turbulent regime by MacKenzie et al. (Limnology & Oceanography, 1994), implies that this relationship is in principle universal across all regimes of water movement.] [pdf]
29-1995 Jenkinson, I.R. & Wyatt, T. Does bloom phytoplankton manage the physical oceanographic environment? In: Lassus, P., Arzul, G., Erard-Le Denn, E., Gentien, P. & Marcaillou-Le Baut, C. (eds), Harmful Marine Algal Blooms, Lavoisier, Paris, 603-608. [pdf]
28-1995 Figueiras, F.G., Wyatt, T., Alvarez-Salgado, X.A. & Jenkinson, I.R. Advection, diffusion and patch development in the rias Baixas. In: Lassus, P., Arzul, G., Erard-Le Denn, E., Gentien, P. & Marcaillou-Le Baut, C. (eds), Harmful Marine Algal Blooms, Lavoisier, Paris, 579-584
27-1994 Epstein, P.R. & Jenkinson, I.R. Highlights of the Sixth International Conference on Toxic Marine Phytoplankton, Nantes, France, 18-22 October 1993. Harmful Algae News, IOC-Unesco, Paris, N 7, pp. 1, 3. [Here]
26-1993 Epstein, P.R. & Jenkinson, I.R. Harmful algal blooms. The Lancet, 342, 1108. [Report on 6th International Conference on Toxic Phytoplankton, held in Nantes, 18-22 Oct., 1993.]
25-1993 Wyatt, T. & Jenkinson, I.R. The North Atlantic turbine: views of production processes from a mainly North Atlantic perspective. Fisheries Oceanography (Festschrift for David Cushing), 2(3/4), 231-243. pdf
24-1993 Jenkinson, I.R. Bulk-phase viscoelastic properties of seawater. Oceanologica Acta, 16(4), 317-334. [Detailed results and discussion of rheological measurements made on seawater samples. pdf . Corrigendum: In the published version, values of "0.71" in both the English and French versions of the Abstract were erroneously printed as "0.17".]
23-1993 Jenkinson, I. Mediterranean invasion by the toxic seaweed Caulerpa taxifolia. Harmful Algae News, IOC-Unesco, Paris, No. 5, p. 7. [Here]
22-1993 Jenkinson, I.R. Viscosity and elasticity of Gyrodinium cf aureolum and Noctiluca scintillans exudates, in relation to mortality in fish and damping of turbulence. In T.J. Smayda & Y. Shimizu (eds), Toxic Phytoplankton Blooms in the Sea. Proceedings of the 5th International Conference on Toxic Marine Phytoplankton, Elsevier Science Publishers, Amsterdam, 757-762. [pdf]
21-1992 Jenkinson, I.R. &
Wyatt, T. Selection and control of Deborah numbers in plankton
ecology. Journal of Plankton Research, 14,
1697- 1721. . [Quantitative aspects of the life of plankton
in a deforming medium.] pdf
20-1992 Jenkinson, I. A seawater rheology group. Harmful Algal News, Intergovernmental Oceanographic Commission, Paris, No. 1, p. 5. [Here]
19-1991 Jenkinson, I.R., Biddanda, B.A., Abreu, P.C., Riebesell, U., Turley, C.M. & Smetacek, V.S. Rheological properties of marine organic aggregates: importance for vertical flux, turbulence and microzones. Oceanologica Acta, Vol. spéc. N 11, 101-107 [Proceedings of the International Colloquium on the Environment of Epicontinental Seas, Lille, 20-22 March, 1990]. [pdf]
18-1990 Jenkinson, I.R. Rheological structure in bulk seawater. In D.R. Oliver (ed.), Third European Rheology Conference and Golden Jubilee Meeting of the British Society of Rheology, Elsevier Applied Science, London, 247-251.
17-1990 Jenkinson, I.R. Bulk rheology of seawater: current developments and future perspectives. Bulletin de l'Association Européenne des sciences et Techniques de la Mer, N 8, 17-20. Also published in Bordomer, 3ième Colloque intérnationale d'Océanologie côtière de Bordeaux, 16-19 octobre, 1989, pp. 35- 41.
16-1990 Jenkinson, I.R. Estuarine plankton of Co. Limerick. I. A recurrent summer bloom of the dinoflagellate, Glenodinium foliaceum Stein, confined to the Deel estuary, with data on microplankton biomass. Irish Naturalists' Journal, 23, 173-180. pdf
15-1989 Jenkinson, I.R. La rhéologie de masse de l'eau de mer. In B. Launay & G. Cuvelier (eds), Rhéologie et Industries Alimentaires, Cosmétiques et Pharmaceutiques, 24ème Colloque Annuel du Groupe Français de Rhéologie, Paris, p. 199.
14-1989 Jenkinson, I.R. Red tides in the Mediterranean and Black Sea. IOC Workshop on International Co-operation in the study of Red Tides and Ocean Blooms, Takamatsu, Japan, 19-17 November 1987 Intergovernmental Oceanographic Commission, Paris, Workshop Report, N 57 (Annex II), p. 18.
13-1989 Jenkinson, I.R. Red tides and toxic phytoplankton on the north and west coasts of France. Ibid., p. 19.
12-1989 Jenkinson, I.R. Increases in viscosity may kill fish in some blooms. In T. Okaichi, D.M. Anderson & T. Nemoto (eds), Red Tides: Biology, Environmental Science and Toxicology, Elsevier, New York, 435-438. [pdf]
11-1988 Jenkinson, I., Abreu, P., Biddanda, B., Ehlken, S., Riebesell, U. & Turley, C. Measurements of aggregate strength. In: Smetacek, V.S. (convenor), Aggregate Methodology Workshop, Alfred-Wegener-Institut, Bremerhaven, 2-3 June 1988, p. 22-23. Abstract Book online
10-1988 Turley, C., Biddanda, B.,
Ehlken, S., Abreu, P., Riebesell, U. & Jenkinson, I.
Laboratory aggregates - some examples, their description and
non-destructive handling during laboratory controlled experiments.
In: Smetacek, V.S. (convenor), Aggregate Methodology
Workshop, Alfred-Wegener-Institut, Bremerhaven, 2-3 June
1988, p. 15-17. Abstract
8-1987 Jenkinson, I.R. Toxic or red-tide phytoplankton blooms around the coast of Ireland from Carnsore Point to Erris Head since 1972. In Dale, B. et al. (see above). The Problems of Toxic Dinoflagellate Blooms in Aquaculture. Proceedings of a Workshop and Conference, Sherkin Island, Ireland, 8-13 June 1987, 47-48.
7-1986 Jenkinson, I.R. Halosphaera viridis, Ditylum brightwellii and other phytoplankton in the northeastern North Atlantic in spring: sinking, rising and relative abundance. Ophelia, 26, 233-253 PDF.
5-1986 Jenkinson, I.R. Is mucus secretion an adaptation to turbulence? Abstracts: 21st European Marine Biology Symposium, Gdansk, p. 33.
4-1985 Jenkinson, I.R. The microplankton biomass and diversity of the upper Shannon estuary (Ireland) and two tributary estuaries. British Phycological Journal, 20, 187.
3-1982 Bracken, J.J., Healy, B., O'Sullivan, G. and Jenkinson, I.R. Marine biological studies at Aughinish Island, Shannon, Co. Limerick 1978-1980. Aughinish Alumina Ltd. 51 pp.
2-1980 Jenkinson, I.R. & Connors, P.P. The occurrence of the red-tide organism, Gyrodinium cf aureolum Hulburt (Dinophyceae), around the south and west coasts of Ireland in August and September, 1979. Journal of Sherkin Island, 1(1), 127-146 pdf.
1-1972 Jenkinson, I.R. Sludge dumping and benthic communities. Marine Pollution Bulletin, 3, 102-105. pdf
THESIS AND DISSERTATION ^
1983 Jenkinson, I.R. Water Movement and Plankton in Strangford Lough. Ph.D. Thesis in Marine Biology, The Queen's University of Belfast, Vol. 1, 236 pp.; Vol. 2, 187 pp.
1971 Jenkinson, I.R. An
investigation into the effects of sludge dumping on the benthos
of the Needles and Nab Spoil Grounds. M.Sc. Dissertation in
Oceanography, The University of Southampton, 37 pp., 5 fig., 7
1999. Jenkinson, I. & Arzul,
G. Rôles de la rhéologie et des
effets liés à l'activité cytolytique dans la dynamique et
l'action toxique de Gymnodinium mikimotoï et d'autres algues
nuisibles. ACRO-lfremer, Rapport final du PNEAT
[Programme National des Effluorescences Algales Toxiques],
1983 Jenkinson, I.R. The Hydrology and Phytoplankton of Bellacragher Bay, Co. Mayo, during and after the Fish Kill, in July and August 1983, 37 pp. [Commissioned by Curraun Fisheries, subsidiary of Arthur Guinness & Son, Dublin, after the death of c. 100 tonnes of salmon associated with a bloom of "Flagellate X".]
1982 Jenkinson, I.R. The Plankton near Aughinish in the Shannon Estuary, Ireland, 411 pp. [Commissioned by Aughinish Alumina Ltd, Aughinish, subsidiary of the Alcan Group, Canada, as baseline study of the plankton in connection with the construction of an alumina plant.]
1982 Jenkinson, I.R. The Tidal and Residual Currents in Southern Newport Bay, County Mayo, Ireland, Department of Oceanography, University College Galway, 108 pp. [Commissioned by Clew Bay Oyster Co-operative Society, Ltd., Westport, Co. Mayo.]